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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915562.1_cds_XP_016465360.1_58321
CDS Infomation

[gene=LOC107788198] [db_xref=GeneID:107788198] [protein=protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic-like isoform X2] [protein_id=XP_016465360.1] [location=complement(join(23151..23162,23485..24444,24532..24792,25244..25468,26050..26622))] [gbkey=CDS]
Sequence

ATGGAGGCTTTAACACACCTAAGCTTCGGCATTTGCACTCCCCGCCTTTCACCACCATTT
CAACTTCCCGCCGCCGGTAAGAAGCCACTGCGACTCAATGCTGTTACCGGCGGAGCTAGT
AGCGTTACCGGTGGAGCAAGTAGTGTCCCGACTAACTTCTCCGCCAGCAAATGGGCTGAT
CGTCTTCTCGCCGACTTCCAATTCCTTCCTTCCACCACCACCTCCACCTCCGACTCACCG
GATTTCCTAAATTCAACTTCCTCTACCGCCACCGCAACTACTCTTCCTCCGCTCTCTCCT
CCTCCAGACCGCCACATTTCTATGCCGATAGACTTTTACAGAGTGCTTGGTGCTGAATCT
CATTTCCTCGGTGACGGTATCAGAAGAGCTTACGATGCTAGAATTACAAAGCCGCCGCAG
TACGGCTACACTCAGGAAGCATTAATTGGCCGACGACAGATTCTTCAAGCTGCTTGTGAA
ACCCTAGCTGACTCTACTTCTCGTAGAGAGTACAATCAAGGCCTTGCCCAGCATGAGTTT
GATACTATTGTTACTCCTGTCCCCTGGGATAAAGTTCCTGGAGCATTATGTGTTTTGCAA
GAAGCTGGTGAGACTGAAGTAGTTCTTCAGATTGGGGAGAGCTTGCTGAAAGAGAGGTTG
CCTAAGTCGTTCAAGCAAGATGTGGTCTTAGCTATGTCACTCGCATATGTTGACCTTTCG
CGGGATGCCATGTCCCTTTCACCTCCTGATTTTGTTAAAGGTTGTGAACTGCTTGAGAGA
GCGCTTAAGCTATTGCAGGAAGAAGGTGCAAGTAATCTTGCCCCTGATCTGCAAGCCCAG
ATAGATGAGACATTGGAAGAGATAAATCCGCGCTACGCACTTGAACTTCTAGCTTTTCCT
CTTGGTGATGAACACCGAATGAAAAGAGCAGAGGGTCTTCAAGGTGTGCGCAATATTTTG
TGGGCTGTTGGAGGAGGTGGAGCAGCTGCAATCTCTGGGGGGTTCACGCGAGAAGATTTC
ATGAACGAGGCCTTCCTACGAATGACAGCTGCTGAGCAGGTGGACCTTTTCGTAGCAACG
CCAAGTAACATTCCTGTAGAAAGCTTTGAAGTTTATGGAGTGGCGCTTGCTCTTGTTGCT
CAAGCTTTTGTTGGGAAAAAACCTCATCTCATCCAAGATGCTGATAACCTTTTTCAGCAA
CTTCAGCAGACAAAAGTAACAGCTTACGGCAGCTCTGTGTCTGTCTACACTGTTAGAGAA
AACCGTGAAATAGACTTTGCTTTGGAGAGGGGCCTTTGTTCACTTCTTGTTGGAGAAGTC
GATGAATGTCGCTCATGGTTGGGCCTAGACAGTGAGGATTCACCCTATAGAGATCCATCT
ATTGTGACTTTTGTTGCAGAACACTCAAAGGATGACAACGAAAATGGTCTGCTCCCTGGA
TTATGTAAGCTTCTGGAGACCTGGTTGATGGAAGTGGTCTTTCCCAGATTTAGAGAGACA
CAAGATATCATTTTCAAGCTTGGAGACTATTATGATGACCCTACTGTTTTAAGATATTTA
GAAAGGCTGGAAGGCGGTGGTGCGTCACCTTTAGCTGCTGCAGCAGCTATTGCAAGGATT
GGAGCTGAAGCTACAGCTGTGCTAGATAGTGTTAAGGCTAGTGCTATTCAGGCATTACAG
AAAGTTTTTCCTGCTGGTGATGGGGAAGGCAGTGTAAGACGATATGGCGACAATGAGATG
AACGAATTTGATATCGCTAAGCCATTTGAGGATCCTGTAGAGCTTCGTGATCAAAATAAT
TTTATCACGTCAGTTGAGGATCCTGAGAGAGTTCCTTCTGGTTATCAGGAGCAAGATATG
ATAACCGACAAAATAAAAGATGCAACCGTGAAGATTATGTGTGCTGGAGTGGCAGTTGGA
TTCTTGACTTTGGTTGGATTGAAGCTTTCTTCCTTTAAACATGGGTCTTCAGTTCTTCGT
AATGGTACTGGTTCAGCTATTGCCTCGGATGTCATCAATGTGCCACACTAG

Peptide Sequence

PEP ID

XP_016465360.1
PEP Infomation

PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MEALTHLSFGICTPRLSPPFQLPAAGKKPLRLNAVTGGASSVTGGASSVPTNFSASKWAD
RLLADFQFLPSTTTSTSDSPDFLNSTSSTATATTLPPLSPPPDRHISMPIDFYRVLGAES
HFLGDGIRRAYDARITKPPQYGYTQEALIGRRQILQAACETLADSTSRREYNQGLAQHEF
DTIVTPVPWDKVPGALCVLQEAGETEVVLQIGESLLKERLPKSFKQDVVLAMSLAYVDLS
RDAMSLSPPDFVKGCELLERALKLLQEEGASNLAPDLQAQIDETLEEINPRYALELLAFP
LGDEHRMKRAEGLQGVRNILWAVGGGGAAAISGGFTREDFMNEAFLRMTAAEQVDLFVAT
PSNIPVESFEVYGVALALVAQAFVGKKPHLIQDADNLFQQLQQTKVTAYGSSVSVYTVRE
NREIDFALERGLCSLLVGEVDECRSWLGLDSEDSPYRDPSIVTFVAEHSKDDNENGLLPG
LCKLLETWLMEVVFPRFRETQDIIFKLGDYYDDPTVLRYLERLEGGGASPLAAAAAIARI
GAEATAVLDSVKASAIQALQKVFPAGDGEGSVRRYGDNEMNEFDIAKPFEDPVELRDQNN
FITSVEDPERVPSGYQEQDMITDKIKDATVKIMCAGVAVGFLTLVGLKLSSFKHGSSVLR
NGTGSAIASDVINVPH

Transcript Sequence

Gene sequence data has not been registered.